Glossary
BACTERIA IDENTIFIED FROM ENVIRONMENTAL SPECIMENS
- Acidovorax avenae (Pseudomonas avenae)
- Acidovorax delafieldii (Pseudomonas delafieldii)
- Acidovoraxspecies
- Acinetobacter anitratus (Acinetobacter calcoaceticus biotype anitratus)
- Acinetobacter anitratus (Acinetobacter calcoaceticus biotype anitratus)
- Acinetobacter anitratus genospecies 13 (Acinetobacter calcoaceticus biotype anitratus)
- Acinetobacter anitratus genospecies 4 (Acinetobacter calcoaceticus biotype anitratus)
- Acinetobacter calcoaceticus
- Acinetobacter calcoaceticus genospecies 13 (Acinetobacter baumanii)
- Acinetobacter calcoaceticus genospecies 2 (Acinetobacter baumanii)
- Acinetobacter calcoaceticus genospecies 3
- Acinetobacter genospecies 10 (Acinetobacter calcoaceticus biotype lwoffii)
- Acinetobacter genospecies 15
- Acinetobacter johnsonii (Acinetobacter calcoaceticus biotype lwoffii)
- Acinetobacter johnsonii genospecies 7 (Acinetobacter calcoaceticus biotype lwoffii)
- Acinetobacter lwoffii (Acinetobacter calcoaceticus biotype lwoffii)
- Acinetobacter radioresistens
- Acinetobacter radioresistens genospecies 12
- Acinetobacter species
- Aerobic Actinomycetales
- Aeromonas caviae DNA group 4
- Aeromonas hydrophilia DNA group 1
- Aeromonas media DNA group 5B
- Aeromonas media-like, DNA group 5A
- Aeromonas salmonicida
- Aeromonas schubertii DNA Group 12
- Aeromonas species
- Aeromonas veronii / sorbria DNA group 8
- Agrobacterium radiobacter (CDC Group Vd-3)
- Agrobacterium rhizogenes
- Agrobacterium rhizogenes A
- Agrobacterium species
- Agrobacterium tumefaciens
- Agrobacterium tumefaciens A
- Agrobacterium vitis
- Alcaligenes faecalis
- Alcaligenes faecalis sub-species homari
- Alcaligenes latus
- Alcaligenes species
- Alcaligenes xylosoxidans subspecies denitrificans (Achromobacter denitrificans)
- Alcaligenes xylosoxidans subspecies xylosoxidans (Achromobacter xylosoxidans)
- Aquaspirillum peregrinum
- Aquaspirillum species
- Aureobacterium species
- Aureobacterium terregens
- Aureobacterium testaceum
- Bacillus (Paenibacillus) azotoformans
- Bacillus (Paenibacillus) macerans
- Bacillus (Paenibacillus) polymyxa
- Bacillus alcalophilus
- Bacillus amyloliquefaciens
- Bacillus amyloliquefaciens
- Bacillus brevis
- Bacillus circulans
- Bacillus coagulans
- Bacillus laevolacticus
- Bacillus lentus
- Bacillus licheniformis
- Bacillus megaterium
- Bacillus mycoides
- Bacillus pasteurii
- Bacillus pumilus
- Bacillus species
- Bacillus sphaericus
- Bacillus subtilis
- Bacillus subtilis variety globigii
- Bacillus thuringiensis
- Brevibacterium acetylicum
- Brevibacterium species
- Brevundimonas diminuta (Pseudomonas diminuta)
- Brevundimonas species (Pseudomonas species)
- Brevundimonas vesicularis (Pseudomonas vesicularis)
- Burkholderia cepacia
- Burkholderia covovenenans
- Burkholderia species
- CDC Group B – 1/B – 3
- CDC Group DF – 3
- CDC Group E
- CDC Group E, Subgroup A
- CDC Group EF – 4
- CDC Group EO – 2 (Eugonic Oxidizer – 2)
- CDC Group II – H
- CDC Group IVc – 2
- CDC Groups
- Cellulomonas cartae
- Chryseobacterium indologenes (Flavobacterium indologenes, Flavobacterium Group IIb)
- Chryseobacterium meningosepticum (Flavobacterium meningosepticum)
- Chryseomonas luteola (Group Ve – 1)
- Citrobacter amalonaticus
- Citrobacter freundii
- Citrobacter koserii (Citrobacter diversus)
- Citrobacter species
- Clavibacter michiganense (Clavibacter michiganense subspecies michiganense) (Corynebacterium michiganense)
- Clavibacter sepedonicum (Clavibacter michiganense subspecies sepedonicum) (Corynebacterium sepedonicum)
- Clavibacter species
- Coagulase negative staphylococci
- Comamonas acidovorans (Pseudomonas acidovorans)
- Comamonas species
- Comamonas terrigena (Vibrio neocistes)
- Commonas testosteroni (Pseudomonas testosteroni)
- Corynebacterium afermentans (CDC Group ANF – 1)
- Corynebacterium aquaticum
- Corynebacterium aquaticum A
- Corynebacterium aquaticum B
- Corynebacterium jeikeium
- Corynebacterium jeikeium A
- Corynebacterium jeikeium B
- Corynebacterium pseudodiphtheriticum
- Corynebacterium species
- Curtobacterium albidum
- Curtobacterium citreum
- Curtobacterium flaccumfaciens
- Curtobacterium luteum
- Curtobacterium species
- Cytophaga johnsonae (Flavobacterium pectinovorum)
- Dermabacter hominis
- Dermacoccus nishinomiyaensis (Micrococcus nishinomiyaensis)
- Enterobacter aerogenes
- Enterobacter agglomerans
- Enterobacter agglomerans biogroup 2A
- Enterobacter agglomerans biogroup 3B
- Enterobacter amnigenus
- Enterobacter asburiae
- Enterobacter cloacae
- Enterobacter gergoviae
- Enterobacter intermedium
- Enterobacter sakazakii
- Enterobacter species
- Enterococcus faecalis
- Escherichia coli
- Ewingella americana
- Flavimonas oryzihabitans (CDC Group Ve-2, Pseudomonas oryzihabitans)
- Flavobacterium balustinum
- Flavobacterium breve
- Flavobacterium gleum (Flavobacterium Group IIb)
- Flavobacterium indologenes (Flavobacterium Group IIb)
- Flavobacterium indoltheticum
- Flavobacterium meningosepticum
- Flavobacterium species
- Gilardi Pink Gram Negative Bacillus
- Gluconobacter oxydans subspecies suboxydans (Gluconobacter cerinus)
- Gordonia species
- Hydrogenophaga flava (Pseudomonas flava)
- Janthinobacterium lividum
- Kingella kingae
- Klebsiella ozaenae
- Klebsiella planticola
- Klebsiella pneumoniae
- Klebsiella species
- Klebsiella terrigena
- Kluyvera cryocrescens
- Kocuria kristinae (Micrococcus kristinae)
- Kocuria rosea (Micrococcus roseus)
- Kocuria species
- Kocuria varians (Micrococcus varians)
- Kurthia zopfii
- Kytococcus sedentarius (Micrococcus sedentarius)
- Leuconostoc paramesenteroides
- Listeria grayi
- Methylobacterium species
- Microbacterium arborescens
- Microbacterium species
- Microbacterium species (CDC Group A – 4)
- Microbacterium species (CDC Group A – 5)
- Micrococcus agilis
- Micrococcus diversus
- Micrococcus luteus
- Micrococcus lylae
- Micrococcus species
- Micromonospora species
- Morganella morganii
- Morganella species
- Mycobacterium chelonae
- Nesterenkonia halobius (Micrococcus halobius)
- Nocardia asteroides
- Nocardia brasiliensis
- Nocardia otitidiscaviarum (Nocardia caviae)
- Nocardia species
- Ochrobactrum anthropi (CDC Group Vd)
- Oerskovia species
- Oerskovia turbata (Cellulomonas turbata)
- Oerskovia xanthineolytica
- Pantoea agglomerans (Enterobacter agglomerans)
- Pantoea agglomerans, biogroup 3 (Enterobacter agglomerans)
- Pantoea agglomerans, biogroup 4 (Enterobacter agglomerans)
- Pasteurella anatipestifer
- Proteus mirabilis
- Proteus myxofaciens
- Proteus penneri
- Proteus species
- Proteus vulgaris
- Providencia rettgeri
- Providencia species
- Providencia stuartii
- Pseudomonas aeruginosa
- Pseudomonas alcaligenes
- Pseudomonas alcaligenes biovar A
- Pseudomonas alcaligenes biovar B
- Pseudomonas andropogonis
- Pseudomonas aurantiaca
- Pseudomonas corrugata
- Pseudomonas diminuta
- Pseudomonas fluorescens
- Pseudomonas fluorescens biotype G
- Pseudomonas mendocina
- Pseudomonas pseudoalcaligenes
- Pseudomonas putida
- Pseudomonas putida biotype A
- Pseudomonas putida biotype B
- Pseudomonas species
- Pseudomonas stutzeri
- Pseudomonas vesicularis
- Pseudomonas viridilivida
- Psychrobacter denitrificans (Kingella denitrificans)
- Psychrobacter immobulis (Moraxella-like organisms)
- Psychrobacter phenylpyruvicus
- Psychrobacter species
- Ralstonia pickettii (Pseudomonas pickettii)
- Rhodococcus equi
- Rhodococcus erythropolis
- Rhodococcus fascians
- Rhodococcus species
- Serratia ficaria
- Serratia liquefaciens
- Serratia marcescens
- Serratia odorifera
- Serratia plymuthica
- Serratia rubidaea
- Serratia species
- Shewanella putrefaciens
- Shewanella putrefaciens A
- Shewanella putrefaciens B
- Shewanella putrefaciens C
- Shewanella putrefaciens D
- Sphingobacterium multivorum (Flavobacterium Group IIK-2)
- Sphingobacterium species
- Sphingobacterium spiritovorum (Flavobacterium spiritivorum)
- Sphingobacterium thalpophilum
- Sphingomonas paucimobilis (Xanthomonas Group IIK – 1)
- Sphingomonas paucimobilis A (Xanthomonas Group IIK – 1)
- Sphingomonas paucimobilis B (Xanthomonas Group IIK – 1)
- Staphylococcus aureus
- Staphylococcus auricularis
- Staphylococcus capitis
- Staphylococcus caprae
- Staphylococcus carnosus
- Staphylococcus caseolyticus
- Staphylococcus cohnii
- Staphylococcus cohnii subspecies cohnii
- Staphylococcus cohnii subspecies urealyticum
- Staphylococcus epidermidis
- Staphylococcus gallinarum
- Staphylococcus haemolyticus
- Staphylococcus haemolyticus Group 1
- Staphylococcus haemolyticus Group 2
- Staphylococcus haemolyticus Group 3
- Staphylococcus hominis
- Staphylococcus hominis Group 1
- Staphylococcus hominis Group 2
- Staphylococcus hominis Group 3
- Staphylococcus hyicus
- Staphylococcus hyicus subspecies chromogenes
- Staphylococcus hyicus subspecies hyicus
- Staphylococcus intermedius
- Staphylococcus kloosii
- Staphylococcus kloosii Group A
- Staphylococcus lentus (Staphylococcus sciuri subspecies lentus)
- Staphylococcus lugdunensis
- Staphylococcus saprophyticus
- Staphylococcus scheiferi
- Staphylococcus scheiferi subspecies coagulans
- Staphylococcus scheiferi subspecies schleiferi
- Staphylococcus sciuri (Staphylococcus sciuri subspecies sciuri)
- Staphylococcus species
- Staphylococcus warneri
- Staphylococcus xylosus
- Staphylococcus xylosus Group 1
- Staphylococcus xylosus Group 2
- Stenotrophomonas maltophilia (Xanthomonas maltophilia, Pseudomonas maltophilia)
- Streptomyces albus
- Streptomyces anulatus (Streptomyces griseus)
- Streptomyces coelicolor
- Streptomyces lateritius
- Streptomyces somaliensis
- Streptomyces species
- Suttonella indologenes (Kingella indologenes)
- Tsukamurella species
- Variovorax paradoxus (Alcaligenes paradoxus)
- Vibrio pelagius 1
- Weeksella zoohelcum (Flavobacterium-like Group IIJ)
- Xanthomonas campestris
- Xanthomonas campestris pathovar vesicatoria A
- Xanthomonas campestris pathovar vesicatoria B
- Xanthomonas oryzae (Xanthomonas campestris pathovar oryzae)
- Xanthomonas oryzae pathovar oryzae B (Xanthomonas campestris pathovar oryzae)
- Xanthomonas oryzae pathovar oryzae E (Xanthomonas campestris pathovar oryzae)
- Xanthomonas species
FUNGI IDENTIFIED FROM ENVIRONMENTAL SPECIMENS
- Absidia corymbifera
- Absidia species
- Absidia spinosa
- Acremonium chrysogenum
- Acremonium fusidioides (Paecilomyces fusidioides)
- Acremonium kiliense (Cephalosporium acremonium)
- Acremonium murorum (Gliomastix murorum)
- Acremonium species (Cephalosporium species)
- Acremonium strictum
- Alternaria alternata
- Alternaria brassicicola
- Alternaria radicina
- Alternaria species
- Alternaria tenuissima
- Apiospora montagnei
- Arthrobotrys species
- Arthroderma cuniculi (Anamorph: Chrysosporium species)
- Arthroderma insingulare (Anamorph: Trichophyton terrestre)
- Arthroderma quadrifidum (Anamorph: Trichophyton terrestre)
- Arthroderma species
- Ascospore
- Aspergillus alutaceus (Aspergillus ochraceus)
- Aspergillus candidus
- Aspergillus clavatus
- Aspergillus flavipes
- Aspergillus flavus
- Aspergillus fumigatus
- Aspergillus glaucus
- Aspergillus nidulans
- Aspergillus niger
- Aspergillus niveus
- Aspergillus oryzae
- Aspergillus parasiticus
- Aspergillus restrictus
- Aspergillus species
- Aspergillus sydowii
- Aspergillus terreus
- Aspergillus ustus
- Aspergillus versicolor
- Aspergillus wentii
- Aureobasidium pullulans
- Beauveria bassiana
- Beauveria species
- Beltrania querna
- Beltrania species
- Bipolaris species
- Bipolaris spicifera
- Bispora betulina
- Bispora species
- Botryotrichum piluliferum
- Botryotrichum species
- Botrytis cinerea
- Botrytis species
- Brachysporium obovatum
- Brachysporium species
- Broomella acuta
- Broomella species
- Candida albicans
- Candida edax
- Candida guilliermondi (Pichia guilliermondi)
- Candida krusei
- Candida parapsilosis
- Candida parapsilosis B
- Candida parapsilosis Group A
- Candida pseudotropicalis
- Candida species
- Candida tropicalis
- Chaetomium elatum
- Chaetomium species
- Chrysosporium asperatum
- Chrysosporium merdarium
- Chrysosporium species
- Cladosporium cladosporioides
- Cladosporium herbarum
- Cladosporium macrocarpum
- Cladosporium species
- Cladosporium sphaerospermum
- Cochliobolus geniculatus
- Cochliobolus lunatus
- Cochliobolus species
- Cochliobolus spicifer
- Conidiobolus coronatus
- Conidiobolus species
- Cryptococcus albidus
- Cryptococcus albidus variety aerius
- Cryptococcus albidus variety diffluens
- Cryptococcus laurentii
- Cryptococcus luteolus
- Cryptococcus species
- Cryptococcus terreus Group B
- Cunninghamella elegans
- Cunninghamella species
- Curvularia geniculata
- Curvularia lunata
- Curvularia species
- Cylindrocarpon candidum
- Cylindrocarpon cylindroides
- Cylindrocarpon species
- Debaryomyces hansenii Group A
- Debaryomyces hansenii Group C
- Debaryomyces species
- Delitschia species
- Diplococcium species
- Diplococcium spicatum
- Drechslera hawaiiensis
- Drechslera rostrata
- Drechslera species
- Emericella nidulans (Anamorph: Aspergillus nidulans)
- Emericella nivea (Anamorph: Aspergillus niveus)
- Emericella rugulosa (Anamorph: Aspergillus rugulosus)
- Emericella species (Anamorph: Aspergillus species)
- Epicoccum purpurascens
- Eurotium amstelodami (Anamorph: Aspergillus amstelodami)
- Eurotium chevalieri (Anamorph: Aspergillus chevalieri)
- Eurotium herbariorum (Anamorph: Aspergillus glaucus)
- Eurotium species (Anamorph: Aspergillus species)
- Exosporium species
- Fusarium arthrosporioides
- Fusarium moniliforme
- Fusarium oxysporum
- Fusarium roseum (Fusarium culmorum)
- Fusarium solani
- Fusarium species
- Geotrichum candidum
- Gliocladium species
- Glomerella species
- Gonatobotryum apiculatum
- Gonatobotryum fuscum
- Gonatobotryum species
- Graphium species
- Helminthosporium species
- Humicola fuscoatra
- Humicola grisea
- Humicola species
- Idriella lunata
- Memnoniella echinata
- Memnoniella species
- Monilia species
- Monodictys species
- Mortierella species
- Mucor circinelloides
- Mucor hiemalis
- Mucor hiemalis form hiemalis
- Mucor plumbeus
- Mucor racemosus
- Mucor species
- Mycogone species
- Myrothecium species
- Neurospora species
- Nigrospora species
- Nigrospora sphaerica
- Oidiodendron griseum
- Oidiodendron species
- Oidiodendron tenuissimum
- Oospora species
- Paecilomyces carneus
- Paecilomyces farinosus
- Paecilomyces lilacinus
- Paecilomyces species
- Paecilomyces variotii
- Papularia species
- Papulaspora immersa
- Papulaspora species
- Penicillium atrovenetum
- Penicillium brevicompactum
- Penicillium canescens
- Penicillium chrysogenum
- Penicillium citrinum
- Penicillium claviforme
- Penicillium corylophilum
- Penicillium daleae
- Penicillium decumbens
- Penicillium digitatum
- Penicillium fellutanum
- Penicillium frequentans
- Penicillium funiculosum
- Penicillium granulatum
- Penicillium griseofulvum
- Penicillium herquei
- Penicillium implicatum
- Penicillium islandicum
- Penicillium italicum
- Penicillium janthinellum
- Penicillium jensenii
- Penicillium lanosum
- Penicillium lividum
- Penicillium nigricans
- Penicillium oxalicum
- Penicillium purpurogenum
- Penicillium restrictum
- Penicillium rubrum
- Penicillium rugulosum
- Penicillium sacculum
- Penicillium simplicissimum
- Penicillium species
- Penicillium spinulosum
- Penicillium steckii
- Penicillium stoloniferum
- Penicillium thomii
- Penicillium variabile
- Penicillium verrucosum variety corymbiferum
- Penicillium verrucosum variety cyclopium
- Penicillium verrucosum variety melanochlorum
- Penicillium verrucosum variety verrucosum
- Penicillium waksmanii
- Periconia species
- Phialophora americana (Phialophora verrucosa)
- Phialophora richardsiae
- Phialophora species
- Phoma eupyrena
- Phoma species
- Pithomyces chartarum
- Plectosphaerella cucumerina
- Pleiochaeta setosa
- Pleospora herbarum
- Pythium species
- Rhinocladiella species
- Rhizopus oryzae (Rhizopus arrhizus)
- Rhizopus rhizopodiformis (Rhizopus microsporus variety rhizopodiformis)
- Rhizopus species
- Rhizopus stolonifer
- Rhodotorula glutinis (Rhodotorula rubra)
- Rhodotorula minuta
- Rhodotorula species
- Scolecobasidium constrictum
- Scolecobasidium species
- Scolecobasidium tshawytschae (Scolecobasidium variable)
- Scopulariopsis brevicaulis
- Scopulariopsis species
- Sepedonium species
- Spegazzinia species
- Spegazzinia tessarthra
- Spondylocladiella species
- Sporidiobolus johnsonii B
- Sporidiobolus species
- Sporothrix schenckii
- Sporothrix species
- Sporotrichum species
- Stachybotrys chartarum
- Staphylotrichum coccosporum
- Stemphylium sarciniforms
- Stemphylium species
- Sterigmatomyces elviae
- Sterile Dematiaceous Hyphomycetes
- Sterile Fungi
- Syncephalastrum racemosum
- Talaromyces emersonii (Anamorph: Penicillium emersonii)
- Talaromyces flavus (Anamorph: Penicillium vermiculatum)
- Talaromyces species (Anamorph: Penicillium species)
- Torula herbarum
- Torula species
- Torulomyces lagena (Monocillium humicola)
- Torulopsis glabrata
- Trichocladium species
- Trichoderma species
- Trichoderma viride
- Trichophyton species
- Trichothecium roseum
- Tritirachium oryzae
- Tritirachium species
- Ulocladium botrytis
- Ulocladium chartarum
- Ulocladium species
- Ustilago maydis
- Ustilago species
- Verticillium species
- Wickerhamiella domercqiae
- Zygorrhynchus moelleri
- Zygosporium gibbum
- Zygosporium masonii
- Zygosporium species